Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Gm15173-201ENSMUST00000122049 433 ntBASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Gm45574-201ENSMUST00000210921 331 ntBASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 AV026068-213ENSMUST00000223675 1171 ntBASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb3Q91XZ7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb3Q91XZ7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Gm7222-201ENSMUST00000117512 906 ntBASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Gm6550-201ENSMUST00000187574 993 ntBASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Gm5244-202ENSMUST00000189517 743 ntBASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb3Q91XZ7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms