Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Gm9385-201ENSMUST00000117563 472 ntBASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Gm8000-201ENSMUST00000188378 592 ntBASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhga3Q91XY5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Gm15427-201ENSMUST00000117288 531 ntBASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Gm14494-201ENSMUST00000118786 435 ntBASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Gm9726-201ENSMUST00000180321 678 ntBASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Gm27525-201ENSMUST00000184465 107 ntBASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Gm5264-201ENSMUST00000190584 848 ntBASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhga3Q91XY5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms