Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.23■□□□□ 0.03
TraipQ8VIG6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.22■□□□□ 0.03
TraipQ8VIG6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.22■□□□□ 0.03
TraipQ8VIG6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.22■□□□□ 0.03
TraipQ8VIG6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Gm18018-201ENSMUST00000198273 408 ntBASIC15.22■□□□□ 0.03
TraipQ8VIG6 Gm9794-201ENSMUST00000202370 423 ntBASIC15.22■□□□□ 0.03
TraipQ8VIG6 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.22■□□□□ 0.03
TraipQ8VIG6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.22■□□□□ 0.03
TraipQ8VIG6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TraipQ8VIG6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.21■□□□□ 0.03
TraipQ8VIG6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.21■□□□□ 0.03
TraipQ8VIG6 Gm11424-201ENSMUST00000121929 829 ntBASIC15.21■□□□□ 0.03
TraipQ8VIG6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.21■□□□□ 0.03
TraipQ8VIG6 Gm5354-201ENSMUST00000182417 973 ntBASIC15.21■□□□□ 0.03
TraipQ8VIG6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Gm8515-201ENSMUST00000194852 576 ntBASIC15.21■□□□□ 0.03
TraipQ8VIG6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TraipQ8VIG6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TraipQ8VIG6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
TraipQ8VIG6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TraipQ8VIG6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.21■□□□□ 0.02
TraipQ8VIG6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TraipQ8VIG6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TraipQ8VIG6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TraipQ8VIG6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TraipQ8VIG6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TraipQ8VIG6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms