Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Gm27622-201ENSMUST00000183779 60 ntBASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Gm8410-201ENSMUST00000117225 605 ntBASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Gm13015-201ENSMUST00000118674 204 ntBASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Mir7023-201ENSMUST00000185093 64 ntBASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retreg1dQ8VE91 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Gm7063-201ENSMUST00000186840 981 ntBASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Gm38294-201ENSMUST00000192831 381 ntBASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Gm18049-201ENSMUST00000208909 581 ntBASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retreg1dQ8VE91 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms