Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Gm9719-201ENSMUST00000162765 543 ntBASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ndc1Q8VCB1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Gm24543-201ENSMUST00000103867 82 ntBASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Gm5566-201ENSMUST00000116118 459 ntBASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Gm9726-201ENSMUST00000180321 678 ntBASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Gm44344-201ENSMUST00000200287 129 ntBASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ndc1Q8VCB1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ndc1Q8VCB1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Ndc1Q8VCB1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ndc1Q8VCB1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ndc1Q8VCB1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ndc1Q8VCB1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ndc1Q8VCB1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ndc1Q8VCB1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ndc1Q8VCB1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ndc1Q8VCB1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ndc1Q8VCB1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ndc1Q8VCB1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Gm27437-201ENSMUST00000183429 107 ntBASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Mir7684-201ENSMUST00000183858 60 ntBASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ndc1Q8VCB1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms