Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.75□□□□□ -0.21
Lsm1Q8VC85 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Gm9727-201ENSMUST00000161387 555 ntBASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Gm8584-201ENSMUST00000171982 758 ntBASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Gm44492-201ENSMUST00000197012 141 ntBASIC13.74□□□□□ -0.21
Lsm1Q8VC85 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Lsm1Q8VC85 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm1Q8VC85 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm1Q8VC85 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm1Q8VC85 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm1Q8VC85 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Lsm1Q8VC85 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm1Q8VC85 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Lsm1Q8VC85 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms