Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Shd-206ENSMUST00000225145 998 ntBASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Zcchc9Q8R1J3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Gm15321-201ENSMUST00000121290 288 ntBASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Mir1897-201ENSMUST00000122581 272 ntBASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Gm9794-201ENSMUST00000202370 423 ntBASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Zcchc9Q8R1J3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Gm14127-201ENSMUST00000117906 678 ntBASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Gm24694-201ENSMUST00000180054 110 ntBASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Gm27663-201ENSMUST00000184839 110 ntBASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Gm6218-201ENSMUST00000219812 628 ntBASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Zcchc9Q8R1J3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms