Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.93■□□□□ 0.3
Atf7Q8R0S1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf7Q8R0S1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf7Q8R0S1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Gm18049-201ENSMUST00000208909 581 ntBASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf7Q8R0S1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Gm2756-201ENSMUST00000195851 400 ntBASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Gm2213-201ENSMUST00000197485 688 ntBASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atf7Q8R0S1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Gm43474-201ENSMUST00000196415 774 ntBASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atf7Q8R0S1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms