Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf4Q8K4J2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Gm8097-201ENSMUST00000117903 829 ntBASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Gm14042-201ENSMUST00000120139 833 ntBASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf4Q8K4J2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Gm13464-201ENSMUST00000119418 935 ntBASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Gm18041-201ENSMUST00000218210 618 ntBASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf4Q8K4J2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms