Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Gm8584-201ENSMUST00000171982 758 ntBASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hist3h2bbQ8CGP0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Gm14117-201ENSMUST00000122417 843 ntBASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Gm7977-201ENSMUST00000193787 748 ntBASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hist3h2bbQ8CGP0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Gm7290-201ENSMUST00000104990 617 ntBASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Gm12918-201ENSMUST00000120234 636 ntBASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Gm15710-201ENSMUST00000121821 636 ntBASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Gm5075-201ENSMUST00000196916 622 ntBASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist3h2bbQ8CGP0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms