Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim52Q8CDV4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim52Q8CDV4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim52Q8CDV4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim52Q8CDV4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim52Q8CDV4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim52Q8CDV4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim52Q8CDV4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim52Q8CDV4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim52Q8CDV4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.58■□□□□ 0.4
Trim52Q8CDV4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim52Q8CDV4 Gm17150-201ENSMUST00000165577 381 ntBASIC17.58■□□□□ 0.4
Trim52Q8CDV4 Gm24420-201ENSMUST00000176676 59 ntBASIC17.58■□□□□ 0.4
Trim52Q8CDV4 Gm43094-201ENSMUST00000196549 921 ntBASIC17.58■□□□□ 0.4
Trim52Q8CDV4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim52Q8CDV4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim52Q8CDV4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim52Q8CDV4 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.57■□□□□ 0.4
Trim52Q8CDV4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Gm15376-201ENSMUST00000122258 783 ntBASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim52Q8CDV4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Gm11524-201ENSMUST00000119349 807 ntBASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.56■□□□□ 0.4
Trim52Q8CDV4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Gm2495-201ENSMUST00000191160 466 ntBASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim52Q8CDV4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms