Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Gm15693-201ENSMUST00000120470 637 ntBASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Gm18737-201ENSMUST00000173594 937 ntBASIC16.69■□□□□ 0.26
Vps53Q8CCB4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps53Q8CCB4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.68■□□□□ 0.26
Vps53Q8CCB4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps53Q8CCB4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.67■□□□□ 0.26
Vps53Q8CCB4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Gm11543-201ENSMUST00000120758 370 ntBASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Gm5866-201ENSMUST00000177881 973 ntBASIC16.67■□□□□ 0.26
Vps53Q8CCB4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps53Q8CCB4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps53Q8CCB4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps53Q8CCB4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vps53Q8CCB4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps53Q8CCB4 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps53Q8CCB4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps53Q8CCB4 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps53Q8CCB4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.66■□□□□ 0.26
Vps53Q8CCB4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.66■□□□□ 0.26
Vps53Q8CCB4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.66■□□□□ 0.26
Vps53Q8CCB4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps53Q8CCB4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.66■□□□□ 0.26
Vps53Q8CCB4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps53Q8CCB4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Vps53Q8CCB4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms