Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Gm15957-201ENSMUST00000118893 974 ntBASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Gm14928-201ENSMUST00000120198 477 ntBASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Gm21854-201ENSMUST00000179901 471 ntBASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Gm9797-201ENSMUST00000052902 613 ntBASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf2Q8BZT2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf2Q8BZT2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Gm28760-201ENSMUST00000185995 736 ntBASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Gm9794-201ENSMUST00000202370 423 ntBASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf2Q8BZT2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms