Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scfd1Q8BRF7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scfd1Q8BRF7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scfd1Q8BRF7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scfd1Q8BRF7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scfd1Q8BRF7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scfd1Q8BRF7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.33■□□□□ 0.2
Scfd1Q8BRF7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scfd1Q8BRF7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scfd1Q8BRF7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scfd1Q8BRF7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Scfd1Q8BRF7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scfd1Q8BRF7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scfd1Q8BRF7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scfd1Q8BRF7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Gm6745-201ENSMUST00000199216 526 ntBASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Gm18624-201ENSMUST00000220966 658 ntBASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Gm19220-201ENSMUST00000222682 803 ntBASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scfd1Q8BRF7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Gm18027-201ENSMUST00000218947 619 ntBASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scfd1Q8BRF7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms