Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bQ80YF6 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Gm27459-201ENSMUST00000184860 107 ntBASIC12.13□□□□□ -0.47
Upk3bQ80YF6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk3bQ80YF6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Gm2272-201ENSMUST00000194903 582 ntBASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Birc2-201ENSMUST00000054878 378 ntBASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.12□□□□□ -0.47
Upk3bQ80YF6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk3bQ80YF6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms