Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Six3Q62233 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.01□□□□□ -0.17
Six3Q62233 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Six3Q62233 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.01□□□□□ -0.17
Six3Q62233 Gm15427-201ENSMUST00000117288 531 ntBASIC14.01□□□□□ -0.17
Six3Q62233 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.01□□□□□ -0.17
Six3Q62233 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.01□□□□□ -0.17
Six3Q62233 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.01□□□□□ -0.17
Six3Q62233 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.01□□□□□ -0.17
Six3Q62233 Gm20553-201ENSMUST00000204205 844 ntBASIC14.01□□□□□ -0.17
Six3Q62233 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.01□□□□□ -0.17
Six3Q62233 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Six3Q62233 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.01□□□□□ -0.17
Six3Q62233 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Six3Q62233 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six3Q62233 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Six3Q62233 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14□□□□□ -0.17
Six3Q62233 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Six3Q62233 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Six3Q62233 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14□□□□□ -0.17
Six3Q62233 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14□□□□□ -0.17
Six3Q62233 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14□□□□□ -0.17
Six3Q62233 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14□□□□□ -0.17
Six3Q62233 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six3Q62233 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Six3Q62233 Ssr1-204ENSMUST00000225319 1610 ntBASIC14□□□□□ -0.17
Six3Q62233 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14□□□□□ -0.17
Six3Q62233 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Six3Q62233 Gm38102-201ENSMUST00000192791 1935 ntBASIC14□□□□□ -0.17
Six3Q62233 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.99□□□□□ -0.17
Six3Q62233 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Six3Q62233 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.99□□□□□ -0.17
Six3Q62233 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Acot6-202ENSMUST00000222921 3622 ntBASIC13.99□□□□□ -0.17
Six3Q62233 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Six3Q62233 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Six3Q62233 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.99□□□□□ -0.17
Six3Q62233 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.99□□□□□ -0.17
Six3Q62233 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.99□□□□□ -0.17
Six3Q62233 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.99□□□□□ -0.17
Six3Q62233 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six3Q62233 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms