Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Gm13612-201ENSMUST00000119276 390 ntBASIC13.66□□□□□ -0.22
Rai1Q61818 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.66□□□□□ -0.22
Rai1Q61818 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Rai1Q61818 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.66□□□□□ -0.22
Rai1Q61818 Gm27731-201ENSMUST00000185192 107 ntBASIC13.66□□□□□ -0.22
Rai1Q61818 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.66□□□□□ -0.22
Rai1Q61818 Gm42693-201ENSMUST00000196779 631 ntBASIC13.66□□□□□ -0.22
Rai1Q61818 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rai1Q61818 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.66□□□□□ -0.22
Rai1Q61818 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rai1Q61818 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.65□□□□□ -0.22
Rai1Q61818 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.65□□□□□ -0.22
Rai1Q61818 Gm15198-201ENSMUST00000117283 177 ntBASIC13.65□□□□□ -0.22
Rai1Q61818 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.65□□□□□ -0.22
Rai1Q61818 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.65□□□□□ -0.22
Rai1Q61818 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.65□□□□□ -0.22
Rai1Q61818 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.65□□□□□ -0.22
Rai1Q61818 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Rai1Q61818 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rai1Q61818 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.65□□□□□ -0.22
Rai1Q61818 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.65□□□□□ -0.22
Rai1Q61818 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Rai1Q61818 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rai1Q61818 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Rai1Q61818 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.65□□□□□ -0.22
Rai1Q61818 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rai1Q61818 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.65□□□□□ -0.22
Rai1Q61818 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Rai1Q61818 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.65□□□□□ -0.22
Rai1Q61818 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.65□□□□□ -0.22
Rai1Q61818 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.65□□□□□ -0.22
Rai1Q61818 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rai1Q61818 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.64□□□□□ -0.23
Rai1Q61818 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rai1Q61818 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Rai1Q61818 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rai1Q61818 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rai1Q61818 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rai1Q61818 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rai1Q61818 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.64□□□□□ -0.23
Rai1Q61818 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Rai1Q61818 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Rai1Q61818 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rai1Q61818 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rai1Q61818 Gm29741-201ENSMUST00000192667 421 ntBASIC13.64□□□□□ -0.23
Rai1Q61818 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.64□□□□□ -0.23
Rai1Q61818 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.64□□□□□ -0.23
Rai1Q61818 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rai1Q61818 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rai1Q61818 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.64□□□□□ -0.23
Rai1Q61818 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rai1Q61818 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Rai1Q61818 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rai1Q61818 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms