Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vsx2Q61412 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.01□□□□□ -0.17
Vsx2Q61412 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14□□□□□ -0.17
Vsx2Q61412 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14□□□□□ -0.17
Vsx2Q61412 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vsx2Q61412 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vsx2Q61412 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Gm43205-201ENSMUST00000198622 1968 ntBASIC14□□□□□ -0.17
Vsx2Q61412 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vsx2Q61412 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vsx2Q61412 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14□□□□□ -0.17
Vsx2Q61412 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Vsx2Q61412 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14□□□□□ -0.17
Vsx2Q61412 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14□□□□□ -0.17
Vsx2Q61412 Gm43474-201ENSMUST00000196415 774 ntBASIC14□□□□□ -0.17
Vsx2Q61412 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vsx2Q61412 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.99□□□□□ -0.17
Vsx2Q61412 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.99□□□□□ -0.17
Vsx2Q61412 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.99□□□□□ -0.17
Vsx2Q61412 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Vsx2Q61412 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.99□□□□□ -0.17
Vsx2Q61412 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Gm8396-201ENSMUST00000057361 823 ntBASIC13.99□□□□□ -0.17
Vsx2Q61412 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.99□□□□□ -0.17
Vsx2Q61412 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.99□□□□□ -0.17
Vsx2Q61412 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vsx2Q61412 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vsx2Q61412 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx2Q61412 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vsx2Q61412 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Vsx2Q61412 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.98□□□□□ -0.17
Vsx2Q61412 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vsx2Q61412 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vsx2Q61412 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vsx2Q61412 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.98□□□□□ -0.17
Vsx2Q61412 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.98□□□□□ -0.17
Vsx2Q61412 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.98□□□□□ -0.17
Vsx2Q61412 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vsx2Q61412 Gm27920-201ENSMUST00000183953 96 ntBASIC13.98□□□□□ -0.17
Vsx2Q61412 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Vsx2Q61412 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms