Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfaip3Q60769 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfaip3Q60769 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfaip3Q60769 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfaip3Q60769 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Tnfaip3Q60769 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfaip3Q60769 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.51□□□□□ -0.25
Tnfaip3Q60769 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfaip3Q60769 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Gm14767-201ENSMUST00000121559 586 ntBASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Gm27533-201ENSMUST00000183800 152 ntBASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.5□□□□□ -0.25
Tnfaip3Q60769 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfaip3Q60769 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Gm14042-201ENSMUST00000120139 833 ntBASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Gm10275-202ENSMUST00000168697 495 ntBASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Gm38294-201ENSMUST00000192831 381 ntBASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Gm20949-201ENSMUST00000206478 952 ntBASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Gm10275-201ENSMUST00000092620 635 ntBASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Efs-202ENSMUST00000227037 2540 ntBASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tnfaip3Q60769 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Tnfaip3Q60769 Gm27306-201ENSMUST00000183970 107 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms