Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Mir497b-201ENSMUST00000093601 125 ntBASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Gm13297-201ENSMUST00000120205 934 ntBASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Gm37497-201ENSMUST00000195830 798 ntBASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vars2Q3U2A8 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Gm16379-201ENSMUST00000161469 348 ntBASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Gm8762-201ENSMUST00000193486 339 ntBASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Gm38158-201ENSMUST00000194617 339 ntBASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vars2Q3U2A8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Gm7029-201ENSMUST00000173226 450 ntBASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Gm9445-201ENSMUST00000207454 1285 ntBASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Gm4935-201ENSMUST00000221316 1198 ntBASIC17.54■□□□□ 0.4
Vars2Q3U2A8 CT030182.1-201ENSMUST00000225935 533 ntBASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.54■□□□□ 0.4
Vars2Q3U2A8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Vars2Q3U2A8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vars2Q3U2A8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vars2Q3U2A8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vars2Q3U2A8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vars2Q3U2A8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms