Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.31□□□□□ -0.44
Smn1P97801 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Smn1P97801 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smn1P97801 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.3□□□□□ -0.44
Smn1P97801 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.3□□□□□ -0.44
Smn1P97801 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Smn1P97801 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Smn1P97801 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Smn1P97801 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.3□□□□□ -0.44
Smn1P97801 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Smn1P97801 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.3□□□□□ -0.44
Smn1P97801 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.3□□□□□ -0.44
Smn1P97801 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Gm4899-201ENSMUST00000178708 719 ntBASIC12.3□□□□□ -0.44
Smn1P97801 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.3□□□□□ -0.44
Smn1P97801 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Smn1P97801 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.3□□□□□ -0.44
Smn1P97801 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Smn1P97801 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Smn1P97801 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smn1P97801 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smn1P97801 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Smn1P97801 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.29□□□□□ -0.44
Smn1P97801 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smn1P97801 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.29□□□□□ -0.44
Smn1P97801 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smn1P97801 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smn1P97801 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.29□□□□□ -0.44
Smn1P97801 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.29□□□□□ -0.44
Smn1P97801 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.29□□□□□ -0.44
Smn1P97801 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.29□□□□□ -0.44
Smn1P97801 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smn1P97801 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Smn1P97801 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.29□□□□□ -0.44
Smn1P97801 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Gm2451-201ENSMUST00000199447 999 ntBASIC12.29□□□□□ -0.44
Smn1P97801 Gm43347-201ENSMUST00000200226 580 ntBASIC12.29□□□□□ -0.44
Smn1P97801 Gm10290-201ENSMUST00000200451 999 ntBASIC12.29□□□□□ -0.44
Smn1P97801 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Smn1P97801 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.29□□□□□ -0.44
Smn1P97801 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smn1P97801 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms