Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Efs-202ENSMUST00000227037 2540 ntBASIC13.57□□□□□ -0.24
Nkx3-2P97503 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.56□□□□□ -0.24
Nkx3-2P97503 Gm13823-201ENSMUST00000119930 345 ntBASIC13.56□□□□□ -0.24
Nkx3-2P97503 Gm14767-201ENSMUST00000121559 586 ntBASIC13.56□□□□□ -0.24
Nkx3-2P97503 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx3-2P97503 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Gm8410-201ENSMUST00000117225 605 ntBASIC13.55□□□□□ -0.24
Nkx3-2P97503 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.55□□□□□ -0.24
Nkx3-2P97503 Mir7684-201ENSMUST00000183858 60 ntBASIC13.55□□□□□ -0.24
Nkx3-2P97503 Gm2451-201ENSMUST00000199447 999 ntBASIC13.55□□□□□ -0.24
Nkx3-2P97503 Gm10290-201ENSMUST00000200451 999 ntBASIC13.55□□□□□ -0.24
Nkx3-2P97503 Gm9182-201ENSMUST00000217829 639 ntBASIC13.55□□□□□ -0.24
Nkx3-2P97503 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Nkx3-2P97503 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms