Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.23□□□□□ -0.77
Rpl39P62892 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.23□□□□□ -0.77
Rpl39P62892 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Rpl39P62892 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.23□□□□□ -0.77
Rpl39P62892 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.23□□□□□ -0.77
Rpl39P62892 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rpl39P62892 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Rpl39P62892 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Rpl39P62892 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.22□□□□□ -0.77
Rpl39P62892 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Rpl39P62892 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Rpl39P62892 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC10.22□□□□□ -0.77
Rpl39P62892 Gm11780-201ENSMUST00000136880 516 ntBASIC10.22□□□□□ -0.77
Rpl39P62892 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.22□□□□□ -0.77
Rpl39P62892 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 AC159106.1-201ENSMUST00000224421 690 ntBASIC10.22□□□□□ -0.77
Rpl39P62892 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Rpl39P62892 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rpl39P62892 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.21□□□□□ -0.77
Rpl39P62892 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Rpl39P62892 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.21□□□□□ -0.77
Rpl39P62892 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Rpl39P62892 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Rpl39P62892 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Gm6659-201ENSMUST00000174752 547 ntBASIC10.21□□□□□ -0.77
Rpl39P62892 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Gm9682-201ENSMUST00000197505 556 ntBASIC10.21□□□□□ -0.77
Rpl39P62892 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC10.21□□□□□ -0.77
Rpl39P62892 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rpl39P62892 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Rpl39P62892 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rpl39P62892 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rpl39P62892 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rpl39P62892 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rpl39P62892 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rpl39P62892 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC10.21□□□□□ -0.78
Rpl39P62892 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rpl39P62892 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rpl39P62892 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms