Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.07□□□□□ -0.32
Lsm3P62311 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.07□□□□□ -0.32
Lsm3P62311 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Gm22697-201ENSMUST00000175194 63 ntBASIC13.07□□□□□ -0.32
Lsm3P62311 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Gm7889-201ENSMUST00000185591 958 ntBASIC13.07□□□□□ -0.32
Lsm3P62311 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.07□□□□□ -0.32
Lsm3P62311 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lsm3P62311 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.07□□□□□ -0.32
Lsm3P62311 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Lsm3P62311 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.07□□□□□ -0.32
Lsm3P62311 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Lsm3P62311 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm3P62311 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.06□□□□□ -0.32
Lsm3P62311 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lsm3P62311 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.06□□□□□ -0.32
Lsm3P62311 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.06□□□□□ -0.32
Lsm3P62311 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.06□□□□□ -0.32
Lsm3P62311 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.06□□□□□ -0.32
Lsm3P62311 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.06□□□□□ -0.32
Lsm3P62311 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Lsm3P62311 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Lsm3P62311 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Lsm3P62311 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.06□□□□□ -0.32
Lsm3P62311 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.06□□□□□ -0.32
Lsm3P62311 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm3P62311 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.05□□□□□ -0.32
Lsm3P62311 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.05□□□□□ -0.32
Lsm3P62311 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.05□□□□□ -0.32
Lsm3P62311 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Lsm3P62311 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lsm3P62311 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.05□□□□□ -0.32
Lsm3P62311 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Lsm3P62311 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.05□□□□□ -0.32
Lsm3P62311 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.05□□□□□ -0.32
Lsm3P62311 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.05□□□□□ -0.32
Lsm3P62311 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lsm3P62311 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.05□□□□□ -0.32
Lsm3P62311 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm3P62311 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Lsm3P62311 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm3P62311 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lsm3P62311 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms