Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.02■□□□□ 0.32
Irf5P56477 Gm28631-201ENSMUST00000190740 334 ntBASIC17.02■□□□□ 0.32
Irf5P56477 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Irf5P56477 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Irf5P56477 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Irf5P56477 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Irf5P56477 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Irf5P56477 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Irf5P56477 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.02■□□□□ 0.31
Irf5P56477 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Irf5P56477 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Irf5P56477 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Irf5P56477 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Irf5P56477 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Irf5P56477 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.01■□□□□ 0.31
Irf5P56477 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.01■□□□□ 0.31
Irf5P56477 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.01■□□□□ 0.31
Irf5P56477 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.01■□□□□ 0.31
Irf5P56477 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Irf5P56477 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Irf5P56477 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf5P56477 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC17■□□□□ 0.31
Irf5P56477 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Gm9856-201ENSMUST00000217077 2578 ntBASIC17■□□□□ 0.31
Irf5P56477 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Irf5P56477 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Gm5566-201ENSMUST00000116118 459 ntBASIC17■□□□□ 0.31
Irf5P56477 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17■□□□□ 0.31
Irf5P56477 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Gm27533-201ENSMUST00000183800 152 ntBASIC17■□□□□ 0.31
Irf5P56477 Gm43433-201ENSMUST00000196573 481 ntBASIC17■□□□□ 0.31
Irf5P56477 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17■□□□□ 0.31
Irf5P56477 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Irf5P56477 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Gm43205-201ENSMUST00000198622 1968 ntBASIC17■□□□□ 0.31
Irf5P56477 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17■□□□□ 0.31
Irf5P56477 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC17■□□□□ 0.31
Irf5P56477 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Irf5P56477 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Irf5P56477 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf5P56477 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf5P56477 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Irf5P56477 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf5P56477 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Irf5P56477 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.99■□□□□ 0.31
Irf5P56477 Gm43868-201ENSMUST00000205187 2114 ntBASIC16.99■□□□□ 0.31
Irf5P56477 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf5P56477 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf5P56477 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Irf5P56477 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.99■□□□□ 0.31
Irf5P56477 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.99■□□□□ 0.31
Irf5P56477 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf5P56477 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Irf5P56477 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Irf5P56477 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Irf5P56477 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf5P56477 Gm44344-201ENSMUST00000200287 129 ntBASIC16.99■□□□□ 0.31
Irf5P56477 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.99■□□□□ 0.31
Irf5P56477 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.99■□□□□ 0.31
Irf5P56477 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.99■□□□□ 0.31
Irf5P56477 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Irf5P56477 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf5P56477 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms