Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.76□□□□□ -0.21
Sox3P53784 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Gm11478-201ENSMUST00000117851 599 ntBASIC13.76□□□□□ -0.21
Sox3P53784 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.76□□□□□ -0.21
Sox3P53784 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
Sox3P53784 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Gm29541-201ENSMUST00000191351 678 ntBASIC13.76□□□□□ -0.21
Sox3P53784 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.76□□□□□ -0.21
Sox3P53784 Gm45384-201ENSMUST00000210451 277 ntBASIC13.76□□□□□ -0.21
Sox3P53784 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Gm7775-201ENSMUST00000218871 853 ntBASIC13.76□□□□□ -0.21
Sox3P53784 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sox3P53784 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sox3P53784 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sox3P53784 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.76□□□□□ -0.21
Sox3P53784 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Sox3P53784 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Sox3P53784 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Sox3P53784 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.75□□□□□ -0.21
Sox3P53784 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.75□□□□□ -0.21
Sox3P53784 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Sox3P53784 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Sox3P53784 Gm15321-201ENSMUST00000121290 288 ntBASIC13.75□□□□□ -0.21
Sox3P53784 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox3P53784 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox3P53784 Gm27680-201ENSMUST00000184192 160 ntBASIC13.75□□□□□ -0.21
Sox3P53784 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox3P53784 Gm38225-201ENSMUST00000194001 393 ntBASIC13.75□□□□□ -0.21
Sox3P53784 Gm6745-201ENSMUST00000199216 526 ntBASIC13.75□□□□□ -0.21
Sox3P53784 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.75□□□□□ -0.21
Sox3P53784 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.75□□□□□ -0.21
Sox3P53784 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox3P53784 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Sox3P53784 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox3P53784 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Sox3P53784 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox3P53784 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox3P53784 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox3P53784 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox3P53784 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox3P53784 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox3P53784 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox3P53784 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox3P53784 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox3P53784 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox3P53784 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox3P53784 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox3P53784 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Sox3P53784 Gm13829-201ENSMUST00000119600 138 ntBASIC13.74□□□□□ -0.21
Sox3P53784 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox3P53784 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.74□□□□□ -0.21
Sox3P53784 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.74□□□□□ -0.21
Sox3P53784 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox3P53784 Gm43630-201ENSMUST00000201550 776 ntBASIC13.74□□□□□ -0.21
Sox3P53784 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.74□□□□□ -0.21
Sox3P53784 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.74□□□□□ -0.21
Sox3P53784 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.74□□□□□ -0.21
Sox3P53784 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.74□□□□□ -0.21
Sox3P53784 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox3P53784 Gm6180-201ENSMUST00000065243 498 ntBASIC13.74□□□□□ -0.21
Sox3P53784 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sox3P53784 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox3P53784 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox3P53784 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox3P53784 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms