Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Brca1P48754 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Brca1P48754 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Brca1P48754 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Brca1P48754 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.81■□□□□ 0.12
Brca1P48754 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.81■□□□□ 0.12
Brca1P48754 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Brca1P48754 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Brca1P48754 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.81■□□□□ 0.12
Brca1P48754 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Brca1P48754 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.8■□□□□ 0.12
Brca1P48754 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.8■□□□□ 0.12
Brca1P48754 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.8■□□□□ 0.12
Brca1P48754 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.8■□□□□ 0.12
Brca1P48754 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Brca1P48754 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.8■□□□□ 0.12
Brca1P48754 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.8■□□□□ 0.12
Brca1P48754 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.8■□□□□ 0.12
Brca1P48754 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Gm44397-201ENSMUST00000195950 113 ntBASIC15.8■□□□□ 0.12
Brca1P48754 Gm44364-201ENSMUST00000198368 141 ntBASIC15.8■□□□□ 0.12
Brca1P48754 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Brca1P48754 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Brca1P48754 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Brca1P48754 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.79■□□□□ 0.12
Brca1P48754 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Brca1P48754 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Brca1P48754 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Brca1P48754 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Brca1P48754 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Brca1P48754 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Brca1P48754 Gm10156-201ENSMUST00000122364 462 ntBASIC15.79■□□□□ 0.12
Brca1P48754 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Brca1P48754 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Brca1P48754 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Brca1P48754 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Brca1P48754 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Brca1P48754 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.79■□□□□ 0.12
Brca1P48754 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.79■□□□□ 0.12
Brca1P48754 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Brca1P48754 Mir686-201ENSMUST00000102174 109 ntBASIC15.78■□□□□ 0.12
Brca1P48754 Gm15371-201ENSMUST00000117057 784 ntBASIC15.78■□□□□ 0.12
Brca1P48754 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.78■□□□□ 0.12
Brca1P48754 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.78■□□□□ 0.12
Brca1P48754 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.78■□□□□ 0.12
Brca1P48754 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Brca1P48754 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.78■□□□□ 0.12
Brca1P48754 Cts7-204ENSMUST00000225321 1257 ntBASIC15.78■□□□□ 0.12
Brca1P48754 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.78■□□□□ 0.12
Brca1P48754 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Brca1P48754 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Brca1P48754 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Brca1P48754 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Brca1P48754 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Brca1P48754 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Brca1P48754 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.77■□□□□ 0.12
Brca1P48754 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Brca1P48754 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms