Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vps4bP46467 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
Vps4bP46467 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vps4bP46467 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Vps4bP46467 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 Gm5479-201ENSMUST00000160578 435 ntBASIC14.56□□□□□ -0.08
Vps4bP46467 Gm9727-201ENSMUST00000161387 555 ntBASIC14.56□□□□□ -0.08
Vps4bP46467 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 Gm37230-201ENSMUST00000194491 818 ntBASIC14.56□□□□□ -0.08
Vps4bP46467 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.56□□□□□ -0.08
Vps4bP46467 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.56□□□□□ -0.08
Vps4bP46467 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.56□□□□□ -0.08
Vps4bP46467 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.56□□□□□ -0.08
Vps4bP46467 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.56□□□□□ -0.08
Vps4bP46467 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.56□□□□□ -0.08
Vps4bP46467 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Vps4bP46467 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.56□□□□□ -0.08
Vps4bP46467 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Vps4bP46467 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.55□□□□□ -0.08
Vps4bP46467 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vps4bP46467 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vps4bP46467 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vps4bP46467 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.55□□□□□ -0.08
Vps4bP46467 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Vps4bP46467 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vps4bP46467 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.55□□□□□ -0.08
Vps4bP46467 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.55□□□□□ -0.08
Vps4bP46467 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.55□□□□□ -0.08
Vps4bP46467 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.55□□□□□ -0.08
Vps4bP46467 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.55□□□□□ -0.08
Vps4bP46467 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vps4bP46467 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Vps4bP46467 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps4bP46467 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Vps4bP46467 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Vps4bP46467 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps4bP46467 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vps4bP46467 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vps4bP46467 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.54□□□□□ -0.08
Vps4bP46467 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.54□□□□□ -0.08
Vps4bP46467 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.54□□□□□ -0.08
Vps4bP46467 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vps4bP46467 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.54□□□□□ -0.08
Vps4bP46467 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.54□□□□□ -0.08
Vps4bP46467 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps4bP46467 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Vps4bP46467 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps4bP46467 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4bP46467 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4bP46467 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Vps4bP46467 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4bP46467 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4bP46467 Gm9385-201ENSMUST00000117563 472 ntBASIC14.53□□□□□ -0.08
Vps4bP46467 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4bP46467 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms