Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk2P38575 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk2P38575 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk2P38575 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk2P38575 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk2P38575 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Upk2P38575 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk2P38575 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk2P38575 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Upk2P38575 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Upk2P38575 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Upk2P38575 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.57□□□□□ -0.4
Upk2P38575 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.57□□□□□ -0.4
Upk2P38575 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.57□□□□□ -0.4
Upk2P38575 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.57□□□□□ -0.4
Upk2P38575 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Upk2P38575 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Upk2P38575 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk2P38575 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Upk2P38575 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.56□□□□□ -0.4
Upk2P38575 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm11594-201ENSMUST00000122313 162 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.56□□□□□ -0.4
Upk2P38575 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Upk2P38575 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm29310-201ENSMUST00000185468 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21825-201ENSMUST00000185728 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm29109-201ENSMUST00000185895 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21896-201ENSMUST00000186520 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21873-201ENSMUST00000186728 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21794-201ENSMUST00000187056 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21880-201ENSMUST00000187275 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21826-201ENSMUST00000187451 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21198-201ENSMUST00000188393 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21749-201ENSMUST00000189343 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21901-201ENSMUST00000189568 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm29424-201ENSMUST00000189716 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm28599-201ENSMUST00000189838 694 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21867-201ENSMUST00000189917 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm29269-201ENSMUST00000190087 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21722-201ENSMUST00000190153 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm28423-201ENSMUST00000190701 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21899-201ENSMUST00000190745 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21910-201ENSMUST00000191163 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21849-201ENSMUST00000191571 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm28678-201ENSMUST00000191593 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm20910-201ENSMUST00000193268 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 Gm21871-201ENSMUST00000194621 696 ntBASIC12.56□□□□□ -0.4
Upk2P38575 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.56□□□□□ -0.4
Upk2P38575 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms