Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sdc1P18828 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.75□□□□□ -0.53
Sdc1P18828 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.75□□□□□ -0.53
Sdc1P18828 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sdc1P18828 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc1P18828 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sdc1P18828 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sdc1P18828 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sdc1P18828 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sdc1P18828 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.74□□□□□ -0.53
Sdc1P18828 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sdc1P18828 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.74□□□□□ -0.53
Sdc1P18828 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sdc1P18828 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.74□□□□□ -0.53
Sdc1P18828 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sdc1P18828 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sdc1P18828 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Sdc1P18828 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sdc1P18828 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sdc1P18828 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.74□□□□□ -0.53
Sdc1P18828 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sdc1P18828 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sdc1P18828 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.73□□□□□ -0.53
Sdc1P18828 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.73□□□□□ -0.53
Sdc1P18828 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.73□□□□□ -0.53
Sdc1P18828 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.73□□□□□ -0.53
Sdc1P18828 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Gm30025-201ENSMUST00000218555 728 ntBASIC11.73□□□□□ -0.53
Sdc1P18828 Gm21559-201ENSMUST00000220638 855 ntBASIC11.73□□□□□ -0.53
Sdc1P18828 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sdc1P18828 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Gm8587-201ENSMUST00000076538 843 ntBASIC11.73□□□□□ -0.53
Sdc1P18828 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sdc1P18828 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sdc1P18828 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sdc1P18828 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.72□□□□□ -0.53
Sdc1P18828 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Sdc1P18828 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.72□□□□□ -0.53
Sdc1P18828 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc1P18828 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc1P18828 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc1P18828 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc1P18828 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sdc1P18828 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sdc1P18828 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms