Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.91□□□□□ -0.34
Ctla2aP12399 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.91□□□□□ -0.34
Ctla2aP12399 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.91□□□□□ -0.34
Ctla2aP12399 Gm44454-201ENSMUST00000198541 138 ntBASIC12.91□□□□□ -0.34
Ctla2aP12399 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.91□□□□□ -0.34
Ctla2aP12399 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.91□□□□□ -0.34
Ctla2aP12399 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ctla2aP12399 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.91□□□□□ -0.34
Ctla2aP12399 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ctla2aP12399 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.91□□□□□ -0.34
Ctla2aP12399 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ctla2aP12399 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ctla2aP12399 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ctla2aP12399 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ctla2aP12399 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ctla2aP12399 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Ctla2aP12399 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ctla2aP12399 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ctla2aP12399 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ctla2aP12399 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Ctla2aP12399 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.9□□□□□ -0.34
Ctla2aP12399 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ctla2aP12399 Gm9726-201ENSMUST00000180321 678 ntBASIC12.9□□□□□ -0.34
Ctla2aP12399 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ctla2aP12399 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ctla2aP12399 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ctla2aP12399 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ctla2aP12399 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ctla2aP12399 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ctla2aP12399 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ctla2aP12399 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.9□□□□□ -0.34
Ctla2aP12399 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ctla2aP12399 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ctla2aP12399 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ctla2aP12399 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ctla2aP12399 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ctla2aP12399 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ctla2aP12399 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Ctla2aP12399 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ctla2aP12399 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.89□□□□□ -0.35
Ctla2aP12399 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ctla2aP12399 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Ctla2aP12399 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.89□□□□□ -0.35
Ctla2aP12399 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.89□□□□□ -0.35
Ctla2aP12399 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.89□□□□□ -0.35
Ctla2aP12399 Rprl3-201ENSMUST00000157400 290 ntBASIC12.89□□□□□ -0.35
Ctla2aP12399 Gm8584-201ENSMUST00000171982 758 ntBASIC12.89□□□□□ -0.35
Ctla2aP12399 Gm6345-202ENSMUST00000180900 204 ntBASIC12.89□□□□□ -0.35
Ctla2aP12399 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ctla2aP12399 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ctla2aP12399 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ctla2aP12399 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ctla2aP12399 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ctla2aP12399 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms