Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc9P09633 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc9P09633 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC18.46■□□□□ 0.55
Hoxc9P09633 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC18.46■□□□□ 0.55
Hoxc9P09633 Ighv1-51-201ENSMUST00000192903 354 ntBASIC18.46■□□□□ 0.55
Hoxc9P09633 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc9P09633 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC18.46■□□□□ 0.55
Hoxc9P09633 Mir497b-201ENSMUST00000093601 125 ntBASIC18.46■□□□□ 0.55
Hoxc9P09633 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Hoxc9P09633 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.46■□□□□ 0.55
Hoxc9P09633 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc9P09633 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc9P09633 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Hoxc9P09633 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC18.46■□□□□ 0.55
Hoxc9P09633 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Hoxc9P09633 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc9P09633 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Hoxc9P09633 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC18.45■□□□□ 0.54
Hoxc9P09633 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Gm9816-201ENSMUST00000122292 1414 ntBASIC18.45■□□□□ 0.54
Hoxc9P09633 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Hoxc9P09633 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.45■□□□□ 0.54
Hoxc9P09633 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Hoxc9P09633 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Gm8775-201ENSMUST00000170943 1327 ntBASIC18.45■□□□□ 0.54
Hoxc9P09633 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 AC115735.4-201ENSMUST00000227460 1944 ntBASIC18.45■□□□□ 0.54
Hoxc9P09633 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc9P09633 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hoxc9P09633 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Gm13689-201ENSMUST00000119360 685 ntBASIC18.44■□□□□ 0.54
Hoxc9P09633 Mir1938-201ENSMUST00000158746 100 ntBASIC18.44■□□□□ 0.54
Hoxc9P09633 AC125117.1-201ENSMUST00000228121 468 ntBASIC18.44■□□□□ 0.54
Hoxc9P09633 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Hoxc9P09633 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Hoxc9P09633 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.44■□□□□ 0.54
Hoxc9P09633 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.44■□□□□ 0.54
Hoxc9P09633 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Hoxc9P09633 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc9P09633 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.43■□□□□ 0.54
Hoxc9P09633 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.43■□□□□ 0.54
Hoxc9P09633 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Hoxc9P09633 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC18.43■□□□□ 0.54
Hoxc9P09633 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Gm8835-201ENSMUST00000173096 1169 ntBASIC18.43■□□□□ 0.54
Hoxc9P09633 Gm24420-201ENSMUST00000176676 59 ntBASIC18.43■□□□□ 0.54
Hoxc9P09633 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Hoxc9P09633 Gm7287-201ENSMUST00000205267 602 ntBASIC18.43■□□□□ 0.54
Hoxc9P09633 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Hoxc9P09633 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC18.43■□□□□ 0.54
Hoxc9P09633 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc9P09633 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms