Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hoxa4P06798 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hoxa4P06798 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hoxa4P06798 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxa4P06798 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Hoxa4P06798 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Hoxa4P06798 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxa4P06798 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxa4P06798 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.08□□□□□ -0.16
Hoxa4P06798 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hoxa4P06798 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.08□□□□□ -0.16
Hoxa4P06798 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Mir8102-201ENSMUST00000184148 139 ntBASIC14.08□□□□□ -0.16
Hoxa4P06798 Gm27989-201ENSMUST00000184721 107 ntBASIC14.08□□□□□ -0.16
Hoxa4P06798 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.08□□□□□ -0.16
Hoxa4P06798 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.08□□□□□ -0.16
Hoxa4P06798 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.08□□□□□ -0.16
Hoxa4P06798 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.08□□□□□ -0.16
Hoxa4P06798 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.08□□□□□ -0.16
Hoxa4P06798 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.08□□□□□ -0.16
Hoxa4P06798 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.08□□□□□ -0.16
Hoxa4P06798 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hoxa4P06798 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.08□□□□□ -0.16
Hoxa4P06798 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.08□□□□□ -0.16
Hoxa4P06798 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxa4P06798 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hoxa4P06798 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Hoxa4P06798 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Gm12585-201ENSMUST00000117307 290 ntBASIC14.07□□□□□ -0.16
Hoxa4P06798 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.07□□□□□ -0.16
Hoxa4P06798 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.07□□□□□ -0.16
Hoxa4P06798 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.07□□□□□ -0.16
Hoxa4P06798 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.07□□□□□ -0.16
Hoxa4P06798 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.07□□□□□ -0.16
Hoxa4P06798 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.07□□□□□ -0.16
Hoxa4P06798 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.07□□□□□ -0.16
Hoxa4P06798 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Hoxa4P06798 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxa4P06798 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hoxa4P06798 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa4P06798 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Hoxa4P06798 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa4P06798 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxa4P06798 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxa4P06798 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms