Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Matn2-206ENSMUST00000228570 2798 ntBASIC12.1□□□□□ -0.47
Ifna1P01572 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ifna1P01572 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ifna1P01572 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ifna1P01572 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Ifna1P01572 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Gm11764-201ENSMUST00000120221 623 ntBASIC12.1□□□□□ -0.47
Ifna1P01572 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ifna1P01572 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Gm45167-201ENSMUST00000208007 322 ntBASIC12.1□□□□□ -0.47
Ifna1P01572 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.1□□□□□ -0.47
Ifna1P01572 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.1□□□□□ -0.47
Ifna1P01572 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ifna1P01572 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ifna1P01572 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ifna1P01572 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ifna1P01572 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.09□□□□□ -0.47
Ifna1P01572 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ifna1P01572 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.09□□□□□ -0.47
Ifna1P01572 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.09□□□□□ -0.47
Ifna1P01572 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ifna1P01572 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ifna1P01572 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ifna1P01572 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.09□□□□□ -0.47
Ifna1P01572 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.09□□□□□ -0.47
Ifna1P01572 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Gm18669-201ENSMUST00000216049 778 ntBASIC12.09□□□□□ -0.47
Ifna1P01572 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ifna1P01572 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.09□□□□□ -0.47
Ifna1P01572 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ifna1P01572 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Ifna1P01572 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.09□□□□□ -0.47
Ifna1P01572 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ifna1P01572 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ifna1P01572 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ifna1P01572 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ifna1P01572 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Ifna1P01572 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Ifna1P01572 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.08□□□□□ -0.48
Ifna1P01572 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.08□□□□□ -0.48
Ifna1P01572 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.08□□□□□ -0.48
Ifna1P01572 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.08□□□□□ -0.48
Ifna1P01572 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ifna1P01572 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.08□□□□□ -0.48
Ifna1P01572 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms