Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopeO89079 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopeO89079 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopeO89079 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CopeO89079 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopeO89079 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopeO89079 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.81□□□□□ -0.04
CopeO89079 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CopeO89079 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopeO89079 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopeO89079 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.81□□□□□ -0.04
CopeO89079 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CopeO89079 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.8□□□□□ -0.04
CopeO89079 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CopeO89079 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.8□□□□□ -0.04
CopeO89079 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CopeO89079 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CopeO89079 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.8□□□□□ -0.04
CopeO89079 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.8□□□□□ -0.04
CopeO89079 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.8□□□□□ -0.04
CopeO89079 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.8□□□□□ -0.04
CopeO89079 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CopeO89079 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.8□□□□□ -0.04
CopeO89079 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CopeO89079 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopeO89079 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.79□□□□□ -0.04
CopeO89079 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CopeO89079 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.79□□□□□ -0.04
CopeO89079 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.79□□□□□ -0.04
CopeO89079 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.79□□□□□ -0.04
CopeO89079 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.79□□□□□ -0.04
CopeO89079 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.79□□□□□ -0.04
CopeO89079 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopeO89079 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.78□□□□□ -0.04
CopeO89079 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CopeO89079 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.78□□□□□ -0.04
CopeO89079 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.78□□□□□ -0.04
CopeO89079 Gm24589-201ENSMUST00000116692 94 ntBASIC14.78□□□□□ -0.04
CopeO89079 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CopeO89079 Gm16026-204ENSMUST00000162652 683 ntBASIC14.78□□□□□ -0.04
CopeO89079 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CopeO89079 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
CopeO89079 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.78□□□□□ -0.04
CopeO89079 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopeO89079 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms