Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.79□□□□□ -0.36
CcnkO88874 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CcnkO88874 Celf4-206ENSMUST00000224553 1729 ntBASIC12.79□□□□□ -0.36
CcnkO88874 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CcnkO88874 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CcnkO88874 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CcnkO88874 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CcnkO88874 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Gm13884-201ENSMUST00000118103 829 ntBASIC12.78□□□□□ -0.36
CcnkO88874 Gm15173-201ENSMUST00000122049 433 ntBASIC12.78□□□□□ -0.36
CcnkO88874 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.78□□□□□ -0.36
CcnkO88874 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Gm10499-201ENSMUST00000174094 934 ntBASIC12.78□□□□□ -0.36
CcnkO88874 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
CcnkO88874 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.78□□□□□ -0.36
CcnkO88874 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.78□□□□□ -0.36
CcnkO88874 Gm18195-201ENSMUST00000207604 706 ntBASIC12.78□□□□□ -0.36
CcnkO88874 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.78□□□□□ -0.36
CcnkO88874 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CcnkO88874 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.78□□□□□ -0.36
CcnkO88874 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CcnkO88874 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CcnkO88874 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CcnkO88874 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CcnkO88874 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CcnkO88874 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CcnkO88874 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CcnkO88874 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CcnkO88874 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CcnkO88874 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CcnkO88874 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CcnkO88874 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CcnkO88874 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CcnkO88874 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CcnkO88874 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CcnkO88874 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.77□□□□□ -0.37
CcnkO88874 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.77□□□□□ -0.37
CcnkO88874 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CcnkO88874 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CcnkO88874 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.77□□□□□ -0.37
CcnkO88874 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CcnkO88874 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CcnkO88874 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CcnkO88874 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.77□□□□□ -0.37
CcnkO88874 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.77□□□□□ -0.37
CcnkO88874 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CcnkO88874 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.77□□□□□ -0.37
CcnkO88874 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CcnkO88874 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CcnkO88874 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CcnkO88874 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CcnkO88874 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CcnkO88874 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CcnkO88874 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms