Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Cops6O88545 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops6O88545 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.44■□□□□ 0.38
Cops6O88545 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops6O88545 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops6O88545 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops6O88545 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cops6O88545 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops6O88545 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cops6O88545 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cops6O88545 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cops6O88545 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops6O88545 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Cops6O88545 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cops6O88545 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cops6O88545 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Cops6O88545 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cops6O88545 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC17.43■□□□□ 0.38
Cops6O88545 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.43■□□□□ 0.38
Cops6O88545 AC162801.1-201ENSMUST00000220612 198 ntBASIC17.43■□□□□ 0.38
Cops6O88545 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.43■□□□□ 0.38
Cops6O88545 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops6O88545 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cops6O88545 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.43■□□□□ 0.38
Cops6O88545 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.43■□□□□ 0.38
Cops6O88545 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops6O88545 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops6O88545 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cops6O88545 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cops6O88545 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.42■□□□□ 0.38
Cops6O88545 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Gm15678-201ENSMUST00000117573 960 ntBASIC17.42■□□□□ 0.38
Cops6O88545 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cops6O88545 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cops6O88545 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Cops6O88545 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.42■□□□□ 0.38
Cops6O88545 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.42■□□□□ 0.38
Cops6O88545 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.42■□□□□ 0.38
Cops6O88545 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cops6O88545 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.42■□□□□ 0.38
Cops6O88545 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cops6O88545 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.41■□□□□ 0.38
Cops6O88545 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.41■□□□□ 0.38
Cops6O88545 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.41■□□□□ 0.38
Cops6O88545 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC17.41■□□□□ 0.38
Cops6O88545 Gm8602-201ENSMUST00000184045 607 ntBASIC17.41■□□□□ 0.38
Cops6O88545 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.41■□□□□ 0.38
Cops6O88545 Gm5425-201ENSMUST00000214125 459 ntBASIC17.41■□□□□ 0.38
Cops6O88545 Gm18027-201ENSMUST00000218947 619 ntBASIC17.41■□□□□ 0.38
Cops6O88545 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.41■□□□□ 0.38
Cops6O88545 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.41■□□□□ 0.38
Cops6O88545 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.41■□□□□ 0.38
Cops6O88545 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cops6O88545 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms