Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trdmt1O55055 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.71■□□□□ 0.11
Trdmt1O55055 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.71■□□□□ 0.11
Trdmt1O55055 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trdmt1O55055 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.71■□□□□ 0.11
Trdmt1O55055 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.71■□□□□ 0.11
Trdmt1O55055 Mir1894-201ENSMUST00000122802 81 ntBASIC15.71■□□□□ 0.11
Trdmt1O55055 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.71■□□□□ 0.11
Trdmt1O55055 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.71■□□□□ 0.11
Trdmt1O55055 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.71■□□□□ 0.11
Trdmt1O55055 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.71■□□□□ 0.11
Trdmt1O55055 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trdmt1O55055 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Trdmt1O55055 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trdmt1O55055 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.71■□□□□ 0.11
Trdmt1O55055 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trdmt1O55055 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trdmt1O55055 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trdmt1O55055 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trdmt1O55055 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trdmt1O55055 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.7■□□□□ 0.1
Trdmt1O55055 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdmt1O55055 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdmt1O55055 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdmt1O55055 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trdmt1O55055 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trdmt1O55055 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.7■□□□□ 0.1
Trdmt1O55055 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.7■□□□□ 0.1
Trdmt1O55055 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.7■□□□□ 0.1
Trdmt1O55055 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.7■□□□□ 0.1
Trdmt1O55055 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdmt1O55055 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdmt1O55055 Gm2495-201ENSMUST00000191160 466 ntBASIC15.7■□□□□ 0.1
Trdmt1O55055 Gm43094-201ENSMUST00000196549 921 ntBASIC15.7■□□□□ 0.1
Trdmt1O55055 Gm17794-201ENSMUST00000220252 955 ntBASIC15.7■□□□□ 0.1
Trdmt1O55055 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trdmt1O55055 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdmt1O55055 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdmt1O55055 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdmt1O55055 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdmt1O55055 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdmt1O55055 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trdmt1O55055 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trdmt1O55055 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trdmt1O55055 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trdmt1O55055 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trdmt1O55055 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trdmt1O55055 Gm12390-201ENSMUST00000117897 397 ntBASIC15.69■□□□□ 0.1
Trdmt1O55055 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.69■□□□□ 0.1
Trdmt1O55055 Mir1982-201ENSMUST00000157368 74 ntBASIC15.69■□□□□ 0.1
Trdmt1O55055 Mir1938-201ENSMUST00000158746 100 ntBASIC15.69■□□□□ 0.1
Trdmt1O55055 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Gm19078-201ENSMUST00000206311 727 ntBASIC15.69■□□□□ 0.1
Trdmt1O55055 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.69■□□□□ 0.1
Trdmt1O55055 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.69■□□□□ 0.1
Trdmt1O55055 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.69■□□□□ 0.1
Trdmt1O55055 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trdmt1O55055 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.68■□□□□ 0.1
Trdmt1O55055 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms