Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Kcnu1O54982 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Kcnu1O54982 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Kcnu1O54982 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Kcnu1O54982 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Kcnu1O54982 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Kcnu1O54982 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Kcnu1O54982 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
Kcnu1O54982 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.26■□□□□ 0.03
Kcnu1O54982 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Kcnu1O54982 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Gm2810-201ENSMUST00000118681 990 ntBASIC15.26■□□□□ 0.03
Kcnu1O54982 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.26■□□□□ 0.03
Kcnu1O54982 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Kcnu1O54982 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.26■□□□□ 0.03
Kcnu1O54982 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.26■□□□□ 0.03
Kcnu1O54982 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Kcnu1O54982 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Kcnu1O54982 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.25■□□□□ 0.03
Kcnu1O54982 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Kcnu1O54982 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Kcnu1O54982 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.25■□□□□ 0.03
Kcnu1O54982 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.25■□□□□ 0.03
Kcnu1O54982 Gm8584-201ENSMUST00000171982 758 ntBASIC15.25■□□□□ 0.03
Kcnu1O54982 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.25■□□□□ 0.03
Kcnu1O54982 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Kcnu1O54982 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Kcnu1O54982 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Kcnu1O54982 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.25■□□□□ 0.03
Kcnu1O54982 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.24■□□□□ 0.03
Kcnu1O54982 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.24■□□□□ 0.03
Kcnu1O54982 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.24■□□□□ 0.03
Kcnu1O54982 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.24■□□□□ 0.03
Kcnu1O54982 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.24■□□□□ 0.03
Kcnu1O54982 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms