Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Polr1aO35134 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Polr1aO35134 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Polr1aO35134 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Polr1aO35134 Gm27682-201ENSMUST00000183930 110 ntBASIC21.66■■□□□ 1.06
Polr1aO35134 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC21.66■■□□□ 1.06
Polr1aO35134 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC21.65■■□□□ 1.06
Polr1aO35134 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Polr1aO35134 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Polr1aO35134 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Polr1aO35134 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Polr1aO35134 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Polr1aO35134 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Polr1aO35134 Gm14723-201ENSMUST00000118686 215 ntBASIC21.65■■□□□ 1.06
Polr1aO35134 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Polr1aO35134 Gm38002-201ENSMUST00000193255 180 ntBASIC21.65■■□□□ 1.06
Polr1aO35134 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC21.65■■□□□ 1.06
Polr1aO35134 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Polr1aO35134 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Polr1aO35134 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Polr1aO35134 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Polr1aO35134 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Polr1aO35134 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC21.65■■□□□ 1.06
Polr1aO35134 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Polr1aO35134 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Polr1aO35134 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Polr1aO35134 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Polr1aO35134 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Polr1aO35134 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Polr1aO35134 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Polr1aO35134 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC21.64■■□□□ 1.06
Polr1aO35134 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC21.64■■□□□ 1.06
Polr1aO35134 Gm17330-201ENSMUST00000221047 165 ntBASIC21.64■■□□□ 1.06
Polr1aO35134 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Polr1aO35134 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Polr1aO35134 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Polr1aO35134 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Polr1aO35134 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Polr1aO35134 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC21.64■■□□□ 1.05
Polr1aO35134 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Polr1aO35134 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Polr1aO35134 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC21.64■■□□□ 1.05
Polr1aO35134 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Polr1aO35134 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Polr1aO35134 Mir8109-201ENSMUST00000184375 117 ntBASIC21.63■■□□□ 1.05
Polr1aO35134 Gm9124-201ENSMUST00000191789 1092 ntBASIC21.63■■□□□ 1.05
Polr1aO35134 Gm9113-201ENSMUST00000192510 1018 ntBASIC21.63■■□□□ 1.05
Polr1aO35134 Gm9131-201ENSMUST00000193557 1089 ntBASIC21.63■■□□□ 1.05
Polr1aO35134 Gm9121-201ENSMUST00000193749 1071 ntBASIC21.63■■□□□ 1.05
Polr1aO35134 Gm43818-201ENSMUST00000200605 466 ntBASIC21.63■■□□□ 1.05
Polr1aO35134 Gm42550-201ENSMUST00000201553 960 ntBASIC21.63■■□□□ 1.05
Polr1aO35134 Gm6013-201ENSMUST00000212264 699 ntBASIC21.63■■□□□ 1.05
Polr1aO35134 AC154171.1-201ENSMUST00000224610 643 ntBASIC21.63■■□□□ 1.05
Polr1aO35134 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Polr1aO35134 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Polr1aO35134 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Polr1aO35134 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Polr1aO35134 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC21.63■■□□□ 1.05
Polr1aO35134 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC21.63■■□□□ 1.05
Polr1aO35134 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Polr1aO35134 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Polr1aO35134 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Polr1aO35134 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Polr1aO35134 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Polr1aO35134 Gm9954-202ENSMUST00000198686 4725 ntBASIC21.63■■□□□ 1.05
Polr1aO35134 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Polr1aO35134 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Polr1aO35134 Gm13886-201ENSMUST00000117876 1183 ntBASIC21.63■■□□□ 1.05
Polr1aO35134 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC21.63■■□□□ 1.05
Polr1aO35134 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC21.63■■□□□ 1.05
Polr1aO35134 Gm43133-201ENSMUST00000197472 463 ntBASIC21.63■■□□□ 1.05
Polr1aO35134 Gm9823-201ENSMUST00000051212 327 ntBASIC21.63■■□□□ 1.05
Polr1aO35134 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Polr1aO35134 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC21.63■■□□□ 1.05
Polr1aO35134 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Polr1aO35134 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Polr1aO35134 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Polr1aO35134 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Polr1aO35134 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Polr1aO35134 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Polr1aO35134 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Polr1aO35134 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Polr1aO35134 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Polr1aO35134 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Polr1aO35134 Gm12537-201ENSMUST00000119266 1002 ntBASIC21.62■■□□□ 1.05
Polr1aO35134 Gm12070-201ENSMUST00000119551 1002 ntBASIC21.62■■□□□ 1.05
Polr1aO35134 Gm12671-201ENSMUST00000119978 1002 ntBASIC21.62■■□□□ 1.05
Polr1aO35134 Gm13292-201ENSMUST00000120014 1000 ntBASIC21.62■■□□□ 1.05
Polr1aO35134 Gm12403-201ENSMUST00000121384 959 ntBASIC21.62■■□□□ 1.05
Polr1aO35134 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC21.62■■□□□ 1.05
Polr1aO35134 Gm10359-201ENSMUST00000180167 1002 ntBASIC21.62■■□□□ 1.05
Polr1aO35134 Gm12033-201ENSMUST00000180654 1002 ntBASIC21.62■■□□□ 1.05
Polr1aO35134 Gm5559-201ENSMUST00000180755 1002 ntBASIC21.62■■□□□ 1.05
Polr1aO35134 Gm4335-201ENSMUST00000182581 1004 ntBASIC21.62■■□□□ 1.05
Polr1aO35134 Itm2b-204ENSMUST00000228637 783 ntBASIC21.62■■□□□ 1.05
Polr1aO35134 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Polr1aO35134 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Polr1aO35134 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
Polr1aO35134 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Polr1aO35134 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms