Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Gm11779-201ENSMUST00000118541 368 ntBASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Gm27525-201ENSMUST00000184465 107 ntBASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Gm43514-201ENSMUST00000198852 424 ntBASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Gm15467-201ENSMUST00000120582 445 ntBASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Mir8117-201ENSMUST00000184773 107 ntBASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh9F8VPK8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Gm27920-201ENSMUST00000183953 96 ntBASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh9F8VPK8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh9F8VPK8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms