Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TprF6ZDS4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TprF6ZDS4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TprF6ZDS4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TprF6ZDS4 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TprF6ZDS4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
TprF6ZDS4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TprF6ZDS4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TprF6ZDS4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TprF6ZDS4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
TprF6ZDS4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TprF6ZDS4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TprF6ZDS4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TprF6ZDS4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TprF6ZDS4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TprF6ZDS4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TprF6ZDS4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TprF6ZDS4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TprF6ZDS4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TprF6ZDS4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.16□□□□□ -0.3
TprF6ZDS4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.16□□□□□ -0.3
TprF6ZDS4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TprF6ZDS4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TprF6ZDS4 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.16□□□□□ -0.3
TprF6ZDS4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TprF6ZDS4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TprF6ZDS4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.16□□□□□ -0.3
TprF6ZDS4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TprF6ZDS4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TprF6ZDS4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TprF6ZDS4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.16□□□□□ -0.3
TprF6ZDS4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TprF6ZDS4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TprF6ZDS4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.15□□□□□ -0.3
TprF6ZDS4 Gm27701-201ENSMUST00000184498 110 ntBASIC13.15□□□□□ -0.3
TprF6ZDS4 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.15□□□□□ -0.3
TprF6ZDS4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
TprF6ZDS4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.15□□□□□ -0.3
TprF6ZDS4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TprF6ZDS4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.15□□□□□ -0.3
TprF6ZDS4 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.15□□□□□ -0.3
TprF6ZDS4 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.15□□□□□ -0.3
TprF6ZDS4 Gm3961-201ENSMUST00000204425 994 ntBASIC13.15□□□□□ -0.3
TprF6ZDS4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TprF6ZDS4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
TprF6ZDS4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TprF6ZDS4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TprF6ZDS4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
TprF6ZDS4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TprF6ZDS4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TprF6ZDS4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TprF6ZDS4 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.14□□□□□ -0.31
TprF6ZDS4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.14□□□□□ -0.31
TprF6ZDS4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.14□□□□□ -0.31
TprF6ZDS4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TprF6ZDS4 Gm18054-201ENSMUST00000207539 555 ntBASIC13.14□□□□□ -0.31
TprF6ZDS4 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.14□□□□□ -0.31
TprF6ZDS4 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.14□□□□□ -0.31
TprF6ZDS4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.14□□□□□ -0.31
TprF6ZDS4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TprF6ZDS4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TprF6ZDS4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TprF6ZDS4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TprF6ZDS4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TprF6ZDS4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TprF6ZDS4 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.14□□□□□ -0.31
TprF6ZDS4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
TprF6ZDS4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.14□□□□□ -0.31
TprF6ZDS4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TprF6ZDS4 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.14□□□□□ -0.31
TprF6ZDS4 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.14□□□□□ -0.31
TprF6ZDS4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TprF6ZDS4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.14□□□□□ -0.31
TprF6ZDS4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TprF6ZDS4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms