Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10477F6SW83 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10477F6SW83 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Gm10477F6SW83 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10477F6SW83 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.28□□□□□ -0.28
Gm10477F6SW83 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10477F6SW83 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10477F6SW83 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.28□□□□□ -0.28
Gm10477F6SW83 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Gm10477F6SW83 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10477F6SW83 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.28□□□□□ -0.28
Gm10477F6SW83 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10477F6SW83 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10477F6SW83 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10477F6SW83 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10477F6SW83 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Gm10477F6SW83 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm10477F6SW83 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Gm10477F6SW83 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Gm10477F6SW83 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.27□□□□□ -0.28
Gm10477F6SW83 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.27□□□□□ -0.28
Gm10477F6SW83 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Gm10477F6SW83 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Gm10477F6SW83 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm10477F6SW83 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Gm8749-201ENSMUST00000117737 331 ntBASIC13.27□□□□□ -0.29
Gm10477F6SW83 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.27□□□□□ -0.29
Gm10477F6SW83 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.27□□□□□ -0.29
Gm10477F6SW83 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.27□□□□□ -0.29
Gm10477F6SW83 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10477F6SW83 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Gm13168-201ENSMUST00000121771 632 ntBASIC13.26□□□□□ -0.29
Gm10477F6SW83 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.26□□□□□ -0.29
Gm10477F6SW83 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.26□□□□□ -0.29
Gm10477F6SW83 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.26□□□□□ -0.29
Gm10477F6SW83 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm10477F6SW83 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10477F6SW83 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10477F6SW83 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10477F6SW83 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10477F6SW83 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10477F6SW83 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Gm10477F6SW83 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms