Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Gm13464-201ENSMUST00000119418 935 ntBASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Grk6-205ENSMUST00000224653 2976 ntBASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm12887B1AVM1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Gm12887B1AVM1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Gm12887B1AVM1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Gm12887B1AVM1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.58□□□□□ -0.56
Gm12887B1AVM1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms