Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Mir686-201ENSMUST00000102174 109 ntBASIC11.49□□□□□ -0.57
Chd6A3KFM7 Gm12203-201ENSMUST00000118235 598 ntBASIC11.49□□□□□ -0.57
Chd6A3KFM7 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Gm12209-201ENSMUST00000120089 596 ntBASIC11.49□□□□□ -0.57
Chd6A3KFM7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Gm25927-201ENSMUST00000175058 117 ntBASIC11.49□□□□□ -0.57
Chd6A3KFM7 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.48□□□□□ -0.57
Chd6A3KFM7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Gm7029-201ENSMUST00000173226 450 ntBASIC11.48□□□□□ -0.57
Chd6A3KFM7 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.48□□□□□ -0.57
Chd6A3KFM7 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.48□□□□□ -0.57
Chd6A3KFM7 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.48□□□□□ -0.57
Chd6A3KFM7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.48□□□□□ -0.57
Chd6A3KFM7 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.48□□□□□ -0.57
Chd6A3KFM7 Gm43094-201ENSMUST00000196549 921 ntBASIC11.48□□□□□ -0.57
Chd6A3KFM7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd6A3KFM7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Chd6A3KFM7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd6A3KFM7 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.47□□□□□ -0.57
Chd6A3KFM7 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms