Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Gm5479-201ENSMUST00000160578 435 ntBASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Gm5864-201ENSMUST00000202263 970 ntBASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Gm13884-201ENSMUST00000118103 829 ntBASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Gm10275-202ENSMUST00000168697 495 ntBASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Gm28659-201ENSMUST00000188013 759 ntBASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Gm10275-201ENSMUST00000092620 635 ntBASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-1A0N8R1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Gm5177-201ENSMUST00000183092 997 ntBASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Gm18195-201ENSMUST00000207604 706 ntBASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-1A0N8R1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-1A0N8R1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12-1A0N8R1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms