Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cfap99A0A140LIX9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cfap99A0A140LIX9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.14■□□□□ 0.33
Cfap99A0A140LIX9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Gm5566-201ENSMUST00000116118 459 ntBASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap99A0A140LIX9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Gm24543-201ENSMUST00000103867 82 ntBASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Gm9719-201ENSMUST00000162765 543 ntBASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap99A0A140LIX9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Gm7653-201ENSMUST00000214567 508 ntBASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.11■□□□□ 0.33
Cfap99A0A140LIX9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms