Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Gm9726-201ENSMUST00000180321 678 ntBASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Gm18669-201ENSMUST00000216049 778 ntBASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Gm30238-201ENSMUST00000195528 2603 ntBASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13-4-dv7A0A075B6C2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm18246-201ENSMUST00000221023 728 ntBASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 AC147366.1-201ENSMUST00000227671 852 ntBASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm18856-201ENSMUST00000178096 1374 ntBASIC9.88□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav13-4-dv7A0A075B6C2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms