Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm25745-201ENSMUST00000174945 133 ntBASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7n-4A0A075B620 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Gm25925-201ENSMUST00000158314 306 ntBASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Gm43799-201ENSMUST00000201845 579 ntBASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7n-4A0A075B620 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Gm45328-201ENSMUST00000210942 917 ntBASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7n-4A0A075B620 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms