Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sft2d3Q9CSV6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sft2d3Q9CSV6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sft2d3Q9CSV6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sft2d3Q9CSV6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sft2d3Q9CSV6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sft2d3Q9CSV6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sft2d3Q9CSV6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sft2d3Q9CSV6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.27□□□□□ -0.45
Sft2d3Q9CSV6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sft2d3Q9CSV6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Gm6973-201ENSMUST00000117080 721 ntBASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Gm18737-201ENSMUST00000173594 937 ntBASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Mir6956-201ENSMUST00000183598 62 ntBASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Matn2-206ENSMUST00000228570 2798 ntBASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sft2d3Q9CSV6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sft2d3Q9CSV6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sft2d3Q9CSV6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.24□□□□□ -0.45
Sft2d3Q9CSV6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sft2d3Q9CSV6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sft2d3Q9CSV6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sft2d3Q9CSV6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sft2d3Q9CSV6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sft2d3Q9CSV6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sft2d3Q9CSV6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms